Atomistry » Silicon » PDB 1fuq-7zpw » 6i4v
Atomistry »
  Silicon »
    PDB 1fuq-7zpw »
      6i4v »

Silicon in PDB 6i4v: Alpha-1-Antitrypsin Queen'S (K154N) Variant

Protein crystallography data

The structure of Alpha-1-Antitrypsin Queen'S (K154N) Variant, PDB code: 6i4v was solved by I.Aldobiyan, D.A.Lomas, J.A.Irving, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.60 / 1.78
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.460, 38.950, 89.850, 90.00, 103.95, 90.00
R / Rfree (%) 18.3 / 21.3

Silicon Binding Sites:

The binding sites of Silicon atom in the Alpha-1-Antitrypsin Queen'S (K154N) Variant (pdb code 6i4v). This binding sites where shown within 5.0 Angstroms radius around Silicon atom.
In total only one binding site of Silicon was determined in the Alpha-1-Antitrypsin Queen'S (K154N) Variant, PDB code: 6i4v:

Silicon binding site 1 out of 1 in 6i4v

Go back to Silicon Binding Sites List in 6i4v
Silicon binding site 1 out of 1 in the Alpha-1-Antitrypsin Queen'S (K154N) Variant


Mono view


Stereo pair view

A full contact list of Silicon with other atoms in the Si binding site number 1 of Alpha-1-Antitrypsin Queen'S (K154N) Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Si402

b:93.2
occ:1.00
SI1 A:H3B402 0.0 93.2 1.0
C09 A:H3B402 1.9 93.0 1.0
C10 A:H3B402 1.9 94.6 1.0
C08 A:H3B402 1.9 92.7 1.0
C06 A:H3B402 1.9 93.8 1.0
C07 A:H3B402 2.8 93.2 1.0
C11 A:H3B402 4.2 94.3 1.0
HG11 A:VAL216 4.2 50.8 1.0
HG21 A:VAL210 4.4 53.1 1.0
HD22 A:ASN390 4.7 57.0 1.0
HG12 A:VAL216 4.7 50.8 1.0
HD21 A:ASN390 4.8 57.0 1.0
CG1 A:VAL216 4.8 42.3 1.0
HG13 A:VAL216 4.8 50.8 1.0
O A:HOH645 4.9 57.3 1.0
HG21 A:THR214 4.9 72.5 1.0
HG11 A:VAL210 5.0 56.5 1.0

Reference:

I.Aldobiyan, J.A.Irving, D.A.Lomas. Structural Determinants of Instability in Alpha-1-Antitrypsin To Be Published.
Page generated: Thu Oct 10 13:22:32 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy