Silicon in PDB, part 1 (files: 1-40),
PDB 1fuq-7zpw
Experimental structures of coordination spheres of Silicon (Si) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Silicon atoms. PDB files: 1-40 (PDB 1fuq-7zpw).
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1fuq (Si: 2) - Fumarase with Bound Pyromellitic Acid
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1fv2 (Si: 2) - The Hc Fragment of Tetanus Toxin Complexed with An Analogue of Its Ganglioside Receptor GT1B
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1fv3 (Si: 4) - The Hc Fragment of Tetanus Toxin Complexed with An Analogue of Its Ganglioside Receptor GT1B
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1nd0 (Si: 4) - Cationic Cyclization Antibody 4C6 Complex with Transition State Analog
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1tuj (Si: 17) - Solution Structure of the Honey Bee General Odorant Binding Protein ASP2 in Complex with Trimethylsilyl-D4 Propionate
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1xz0 (Si: 1) - Crystal Structure of CD1A in Complex with A Synthetic Mycobactin Lipopeptide
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1y3g (Si: 1) - Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Other atoms:
Ca (4);
Zn (1);
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2fud (Si: 2) - Human Cathepsin S with Inhibitor Cra-27566
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2hrl (Si: 1) - Siglec-7 in Complex with GT1B
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2zy0 (Si: 4) - Crystal Structure of the Human Rxr Alpha Ligand Binding Domain Bound to A Synthetic Agonist Compound and A Coactivator Peptide
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3qo9 (Si: 2) - Crystal Structure of Hiv-1 Reverse Transcriptase (Rt) in Complex with Tsao-T, A Non-Nucleoside Rt Inhibitor (Nnrti)
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3wlu (Si: 4) - Crystal Structure of Human Galectin-9 Ncrd with Selenolactose
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4ehr (Si: 1) - Crystal Structure of Bcl-Xl Complex with 4-(5-Butyl-3-(Hydroxymethyl)- 1-Phenyl-1H-Pyrazol-4-Yl)-3-(3,4-Dihydro-2(1H)- Isoquinolinylcarbonyl)-N-((2-(Trimethylsilyl)Ethyl)Sulfonyl)Benzamide
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4mpw (Si: 2) - Human Beta-Tryptase Co-Crystal Structure with [(1,1,3,3- Tetramethyldisiloxane-1,3-Diyl)Di-1-Benzofuran-3,5-Diyl]Bis({4-[3- (Aminomethyl)Phenyl]Piperidin-1-Yl}Methanone)
Other atoms:
Cl (2);
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4mpx (Si: 2) - Human Beta-Tryptase Co-Crystal Structure with [(1,1,3,3- Tetramethyldisiloxane-1,3-Diyl)Di-1-Benzothiene-4,2-Diyl]Bis({4-[3- (Aminomethyl)Phenyl]Piperidin-1-Yl}Methanone)
Other atoms:
Cl (2);
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4mqa (Si: 2) - Human Beta-Tryptase Co-Crystal Structure with {(1,1,3,3- Tetramethyldisiloxane-1,3-Diyl)Bis[5-(Methylsulfanyl)Benzene-3,1- Diyl]}Bis({4-[3-(Aminomethyl)Phenyl]Piperidin-1-Yl}Methanone)
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6abk (Si: 3) - Crystal Structure of Methanosarcina Mazei Pylrs(Y306A/Y384F) Complexed with Teoclys
Other atoms:
Mg (3);
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6b30 (Si: 2) - Structure of Rorgt in Complex with A Novel Inverse Agonist 1
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6c6n (Si: 2) - Human Squalene Epoxidase (Sqle, Squalene Monooxygenase) Structure with Fad and Cmpd-4"
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6i4v (Si: 1) - Alpha-1-Antitrypsin Queen'S (K154N) Variant
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6krg (Si: 1) - Crystal Structure of Sfgfp Y182TMSIPHE
Other atoms:
Cl (3);
Na (1);
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6m6d (Si: 1) - Structure of Hppd Complexed with A Synthesized Inhibitor
Other atoms:
Co (1);
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6qsf (Si: 3) - Crystal Structure of PIZZA6S in the Presence of Keggin (Sta)
Other atoms:
W (36);
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6qsg (Si: 6) - Crystal Structure of the Hybrid Bioinorganic Complex of PIZZA6S and Keggin (Sta)
Other atoms:
W (72);
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6rve (Si: 3) - Co-Substituted Beta-Keggin Bound to Proteinase K Solved By Mr
Other atoms:
W (33);
Co (3);
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6rvg (Si: 4) - Co-Substituted Beta-Keggin Bound to Proteinase K Solved By Mr
Other atoms:
W (44);
Co (4);
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6u2m (Si: 2) - Crystal Structure of A Halotag-Based Calcium Indicator, Halocamp V2, Bound to JF635
Other atoms:
F (4);
Ca (8);
Cl (2);
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6y7o (Si: 20) - The Complex Between the Eight-Bladed Symmetrical Designer Protein TAKO8 and the Silicotungstic Acid Keggin (Sta)
Other atoms:
W (240);
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7a9f (Si: 2) - Co-Substituted Keggin Silicotungstate with Covalent Bond to Proteinase K
Other atoms:
W (22);
Co (2);
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7a9k (Si: 2) - Co-Substituted Keggin Silicotungstate with Covalent Bond to Proteinase K
Other atoms:
Co (2);
W (22);
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7a9m (Si: 2) - Ni-Substituted Keggin Silicotungstate with Covalent Bond to Proteinase K
Other atoms:
W (22);
Ni (2);
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7ax0 (Si: 1) - Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta Form A
Other atoms:
W (12);
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7ax2 (Si: 2) - Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B
Other atoms:
Na (1);
W (23);
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7ckg (Si: 1) - Crystal Structure of Tmsiphers Complexed with Tmsiphe
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7zba (Si: 2) - Halotag with Me-Traq-G Ligand
Other atoms:
Cl (2);
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7zbb (Si: 2) - Halotag with Traq-G-Ctrl Ligand
Other atoms:
Cl (2);
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7zbd (Si: 2) - Halotag with Traq-G Ligand
Other atoms:
Cl (2);
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7zcj (Si: 2) - Crystal Structure of PIZZA6-Tnh-Tsh with Silicotungstic Acid (Sta) Polyoxometalate
Other atoms:
W (24);
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7zph (Si: 4) - Crystal Structure of PIZZA6-Tnk-Rsh with Silicotungstic Acid (Sta) Polyoxometalate
Other atoms:
W (48);
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7zpw (Si: 4) - Crystal Structure of PIZZA6-Tsk-Tsh with Silicotungstic Acid (Sta) Polyoxometalate
Other atoms:
W (48);
Page generated: Tue Feb 25 11:48:19 2025
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