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Silicon in PDB 8uas: Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Protein crystallography data
The structure of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A, PDB code: 8uas
was solved by
L.A.Wilson,
L.W.Guddat,
G.Schenk,
C.Scott,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.22 / 2.20 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 78.144, 157.745, 272.429, 90, 91.06, 90 |
| R / Rfree (%) | 18.2 / 21 |
Other elements in 8uas:
The structure of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A also contains other interesting chemical elements:
| Sodium | (Na) | 4 atoms |
| Zinc | (Zn) | 26 atoms |
Silicon Binding Sites:
The binding sites of Silicon atom in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
(pdb code 8uas). This binding sites where shown within
5.0 Angstroms radius around Silicon atom.
In total 10 binding sites of Silicon where determined in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A, PDB code: 8uas:
Jump to Silicon binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
In total 10 binding sites of Silicon where determined in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A, PDB code: 8uas:
Jump to Silicon binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Silicon binding site 1 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 1 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 1 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 2 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 2 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 2 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 3 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 3 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 3 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 4 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 4 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 4 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 5 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 5 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 5 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 6 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 6 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 6 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 7 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 7 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 7 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 8 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 8 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 8 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 9 out of 10 in 8uas
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Silicon Binding Sites List in 8uas
Silicon binding site 9 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 9 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Silicon binding site 10 out of 10 in 8uas
Go back to
Silicon Binding Sites List in 8uas
Silicon binding site 10 out
of 10 in the Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Silicon with other atoms in the Si binding
site number 10 of Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A within 5.0Å range:
|
Reference:
R.A.Rocha,
L.A.Wilson,
B.D.Schwartz,
A.C.Warden,
L.W.Guddat,
R.E.Speight,
L.Malins,
G.Schenk,
C.Scott.
Structural Characterization of Enzymatic Interactions with Functional Nicotinamide Cofactor Biomimetics Catalysts V. 14 2024.
ISSN: ESSN 2073-4344
DOI: 10.3390/CATAL14070399
Page generated: Thu Oct 10 13:41:40 2024
ISSN: ESSN 2073-4344
DOI: 10.3390/CATAL14070399
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